INDEX

The index that appeared in the print version of this title does not match the pages in your e-book. Please use the search function on your e-reading device to search for terms of interest. For your reference, the terms that appear in the print index are listed below.

acute immune reaction

adaptation

of body parts and functions

vs. struggle for existence

to take advantage of change

adaptive immune system

adaptive perfectionism

Africa, diseases in

African-Americans, riots

afterlife, belief in

airborne transmission

air quality

air travel, microbes exposed to in

algae

Algonquians

Allis-Chalmers

altruism

American history

as taught to schoolchildren

varied populations involved in

American Indian College Fund

American West, geology of

amino acids

synthesis of, on early Earth and in the lab

amoeba

amphibians

amylase

anaerobic bacteria

in the intestines

anatomy, human and animal, compared

animals, cells of

anthropology, intradisciplinary approach of

antibiotics

discovery of

of last resort

overprescription and misuse of

resistance to

treatment with

antibodies

DNA of

number of

antigen-presenting

antigen-presenting cell (APC)

antigens

definition of

number of

in vaccines, body’s response to

antioxidant molecules

ants, and fungi gardens

apes

descent from (Darwin)

free will of

appendix, human

archetypes

Aristotle

assimilation

by contact

of populations

the result of population wars

atmosphere

carbon dioxide in, and global warming

components of

of early Earth, and extinctions

Australia

author (Greg Graffin)

property in upstate New York

automobiles

clean running

and roadkill

bacteria

antibiotic-resistant

control and destruction of

described (size and shape)

essential services of, to the environment

fossil

gene transfer in

in the human body

number of species of

origin of, on early Earth

prokaryotic cells of

protection against oxygen poisoning

way of life of

bacteriophage viruses

Bad Religion band

bald eagle

banded iron formations (BIFs)

Bangladesh

barns, construction of

Battle of Newtown

Battle of Oriskany

B-cells (lymphocytes)

beaches, public access to

bear, short-faced (extinct)

beards, evolution of

beaver, extermination of

beech trees, threatened with extinction

beetles, and tree diseases

behavior

affected by parasites

determinism in

Bell, Ruby

Bhola cyclone

“Big Five” mass extinction events

biofilms

biology

influence of economic theory on

insights from

lack of a unified theory of

nonteleological nature of

biome

biomolecules, synthesis of

biosphere

interdependence in the

stewardship of

birds

breathing of

coloration of related species of

birth control (“moral restraint”)

blame

blood vessels

bogs

bone marrow

brain, human

capacity of

structure of

weeding out neurons in the

brain, of primates

Brant, Joseph

Brant, Molly (Mary)

breathing in

of contagious germs

of oxygen, with lungs

British Empire in North America

in the Revolutionary War

bubonic plague (Black Death)

Buffalo Creek, New York

bumper sticker philosophy

Butler, John

cable connections

California, sedimentary rocks in

California Coastal Commission

Callière, Louis-Hector de

Canada, English possession of

cancer tumors

carbapenems

carbon dioxide

in atmosphere, and global warming

in atmosphere of early Earth, and extinctions

in early Earth, life’s origin from

Cartier, Jacques

casinos, Native American

catalytic converters

Catherine’s Town

Catholic Church

adaptation of, to modern times

Cayuga Indians

cell phones, addiction to, at expense of conversation

cells

death of, and clean up by macrophages

differentiation and division of

on early Earth

evolution of

of human body

parts of (nucleus, organelles)

of plants and animals, differences

somatic and germ

cellulose

Central Africa, disease in

cerebral cortex, cells in

Champlain, Samuel de

Channel Islands, California

chaparral plant

charity for the poor

Charles, Darwin

cheetah (threatened)

chestnut trees, near extinction of

child-bearing, restrictions on

children

helping them to grow up

science education of

chimera

chimpanzees

China

chlorination of drinking water

Christianity, beliefs of

circulation system

cities, rats in

Citizens United

Civil War, American

Clausewitz, Carl von

climate change

belief that disaster is inescapable

carbon dioxide and

current examples of

and extinction

Clinton, James

clothing, appropriate, for visiting churches

coexistence

in nature (web of life)

of populations

vs. struggle for existence

Cologne, Germany, Dom (Cathedral) in

Colorado Plateau

Colorado River

commensualism

communism

comparative anatomy

competition

in business, negative effects of

as explanatory concept in economics, biology, etc.

lack of proof of observation

life as

as mechanism of natural selection

question as to reality of the concept

for resources

in sports

symbiosis vs.

complement (toxin)

compromise, value of

computers, addiction to

computer viruses

consciousness, origin of

Continental Army

conversations

multiple

with people of opposing views

coral reefs

Cornell University

corporate personhood (“corporations are people”) idea

corpses, unsafe burial practices

Correns, Karl

cortex

cowboys

Crick, Francis

crude oil

culture change

cyanobacteria

cyclones, and loss of life

cytoskeleton

Darwin, Charles

On the Origin of Species

pangenesis theory

Darwinism

an excuse for cruelty and to pass judgment

traditional “survival of the fittest” type of

Dawkins, Richard

DDT

Delco Remy

democracy

Democratic party

determinism, in human behavior

de Vries, Hugo

digestion of food

dinoflagellates

diseases

in Africa

chronic, from longer lifespans

spread of

teleological explanation for (God)

“war” on

disinfectants, resistance to

disturbed habitats

DNA

sequencing of

valueless portions of

viruses as part of

dodo

dogs, decision-making by

Dom (Cathedral) in Cologne, Germany

Down syndrome

drinking water, treating of

Dutch, in North America

Earth

disturbed by human activity

environmental stewardship of

Gaia hypothesis

Earth, early

formation of

geologic epochs of

life’s origins on

earthquakes

and loss of life

Eastern America, geology of

Ebola virus

ecological web

ecology movement

economic theory, influence of biology theories on

ecosystems

preservation of

transformed by suburbs

“the Edge” (guitarist)

election laws

elephants (threatened)

Elizabeth I

elm trees, near extinction of

embryos, development of

empathy

and ameliorating suffering

lack of

endangered species, protection of

endogenization

endosymbiosis (and theory of evolution)

enemies

desire to vanquish

inventing them, as excuse for violence

vanquished, that assimilate

vanquished, that rebound and rebuild

English

in colonial upstate New York

See also British Empire in North America

environment

vs. heredity, in individual development

humans’ control over

environmental crisis, dealing with

environmentalists, misguided attitudes of, re other species

environmental stewardship

of planet Earth

reason for

in rural communities

of wilderness

epidemics, exponential growth of cases

Erie Canal

Erie nation

eugenics

eukaryotes

as chimera

origin of, as protection against viral attack

origin of, on early Earth

evil

evolution

definition of (“descent with modification”)

episodic rather than smoothly branching

epochs in

falsely thought to be no longer affecting humans

in localized populations

mathematical treatment of

nonteleological nature of

a product of symbiosis

progress in, supposed

rejection of progressive and purposive explanations

slow and hard to see

teaching of, to students

evolutionary science

evolutionary synthesis

evolutionary tradeoff

evolution management (evolution of other species)

existence of a species

no purpose in

reason for, Aristotle’s view

extinction

climate change and

speed and time span of

extinctions, specific

of the human race

mass

of megafauna

“sixth” (of humans)

of species

of trees

fads and trends

failures, of workers, after shut down of businesses

fallacy of misplaced concreteness

Famennian

families, multiethnic

farming, Native American

fiberoptic

financial panic of 2007

Finger Lakes region

geology of

Native Americans in

in the Revolutionary War

fishes

evolution of

free will of

oxygen intake of

Five Nations

fleas

Fleming, Alexander

flickers, coloration of related species of

Florida Keys

fluoridation of drinking water

food

arithmetic increase in quantity

of humans, variety of

microbes on

struggle for (Malthusianism)

food poisoning

forests, healthy vs. diseased

Fort Niagara

forts, French and English, in upstate New York

fossil fuels

fossils

bacteria

exposure of

the fossil record

Francis, Pope

Frasnian

freedom of religion

freedom of speech (First Amendment)

free market

free will

belief in

definition of

disbelief in, beneficial effect of

not an explanation for success or failure

origin of, in evolutionary history, as question

reluctance of biologists to discuss

French

in colonial upstate New York

traders

French and Indian War

French Empire in North America

frogs

fundamentalist Christians

fungus infection, and tree extinctions

fur trade

Gaia hypothesis

Galton, Francis

gambling

gardening

gas companies (fracking)

Gates. Horatio

gemmules (Darwin)

gene pool

genes

in DNA

passed along

preventing spread of bad ones (eugenics)

shared, in a population

transfer of, vertical vs. horizontal

transmission of, to offspring

transposition of, assisted by viruses

variant (alleles) and disease

genetic code, sequencing of

genetic fusion

genetic screenings

genetic variations

spread of successful ones

viruses contributing to

Genghis Khan

genocide

genome, viruses as part of

geology

author’s training in

and knowledge of biology

George III

Germany, church attendance in

germ cells (sex cells)

germinal selection theory

germ plasm theory

“getting along” (Rodney King)

giraffes, long neck of

glaciers

periods of glaciation

in Pleistocene epoch

retreating

global travel

microbes spread by

and panmictic mating

global warming

politics of

God

God’s will or plan

“going viral”

gonorrhea, untreatable

Google Earth

government, need for, to protect environment

Grand Canyon

Great Lakes region

Green Bay, Wisconsin

greenhouse gases

Guinea

gut-brain axis

Hamilton, William

handshake, refusing a

haves and have-nots, reason for

hawk, vision of

hawks and doves (in war)

Helicobacter pylori

Henry VIII

herbicides

heredity

Darwin’s ignorance of

vs. environment, in individual development

theory of

Herkimer, Nicholas

heroes in history

history

demarcation of, by wars

population wars in

HIV

holobiont

homeless people

honeysuckle

horses, evolution of

horseshoe crabs

horsetails

Hudson, Thomas (Telenemut)

hugging, as automatic reflex

human beings

adaptability of

coexistence of, and value of compromise

getting along with each other

human body, number of cells in

human exceptionalism

human genome

inheritances in

sequencing of

viral load of (about half)

humanism

human nature, belief that it is born good

human population

in 1300s

in 1800s

in 1900s

in 2000s (7.1 billion in 2015)

geometric increase in numbers

growth of, and war

managing of

persistence of, despite diseases, wars, natural disasters

slowing the rate of increase

stewardship of

human race (Homo sapiens)

belief that we are the ultimate in evolution

brain size of

control of planet and selves

descent from apes (Darwin)

disdain for the

evolution of, in the future

extermination of, desired by some environmentalists

extinction of, possible

extinction of, potentially avoidable

geological age of

improvement of, through eugenics

origin and purpose of

subpopulations in, and war

unique abilities and place of

Hunt, George

hunting and gathering

Hurons

dispersion of

hydrocarbons (oil), formation of, in shale in oceans

hydrogen peroxide

from neutrophils

hydrogen sulfide

“I,” a coalition of many populations

ideas

compared to mutations

spread of, like disease

ideologies, flawed, leading to war

Illinois

immune system

“educated” by exposure to microbes

evolution of

two parts of, innate and adaptive

warfare analogy, not accurate

imported goods, at expense of American manufactures

Indian Ocean, storm surge in, and large-scale loss of life (2004)

individuals, heredity and environment affecting development of

Indonesia

infections, not treatable in colonial era

inflammation

three factors of (redness, heat, swelling)

influenza (flu)

avian and swine

injury

acute immune response to

potential route for infection

innate immune system

intelligence testing (IQ test)

intelligent-design creationists

interdisciplinary approach in science

International Harvester

Internet

viruses on the

intestinal bacteria

intestines, inflammation of

invasive species

invertebrates, immune system of

IPCC

Iroquoia

Iroquois Confederacy

civil war within

Iroquois Indians

land use

as middlemen in the fur trade

population in upstate New York in colonial times

survival of

warfare

Ithaca, New York

-itis diseases

Jackson, Andrew

Japan

jellyfish

J.I. Case

job loss in 1980s manufacturing

Johnson, Guy

Johnson, John

Johnson, Sir William

Johnson family

“junk” DNA

Kaibab Plateau

“Keep America Beautiful” campaign

Kellogg, Vernon

kerogen

King, Rodney

“know thyself” (Socrates)

labor, cheap overseas

La Brea tar pits

hypothetical future of

ladybugs, spots on

Lake, James

Lamarck, Jean-Baptiste

lancelots

land

European vs. Native American view of

exploited for wealth, by Europeans in upstate New York

value of, for different uses

land animals

land-grant universities

La Salle, Réné-Robert de

Late Devonian

lawns and gardens

laws, punishment under

Leeuwenhoek, Antoni van

Lenin

leveraged buyouts

Lewontin, Richard

Liberia

life

as competition

definition of, replication essential to

origin of, on Earth

purpose of (none)

littering, roadside

liver

living fossils

lizards, free will of

logging, to resist tree blight

Los Angeles

1994 riots

park land in

punk subculture in

rats of

smog in

suburbs of

Los Angeles Police Department (LAPD)

Louis Philippe

Lovelock, James

Loyalists

lungfishes

lungs

Luther, Martin

lymphatic system

lymph nodes

lymphocytes

Lysol

macrophages

“makers” and “takers”

malaria

eliminating

males, fighting for dominance and for mates

Malthus, Thomas

An Essay on the Principle of Population

mammals

free will of

and viruses, symbiosis of

mammoths

manufacturing

job loss in 1980s

vitality of, in first half of 20th century

mapping the earth

Marcellus Shale

Margulis, Lynn

Marvel comic-book movies

Mary I

mass media, environmental awareness promoted by

mastodons

Mauritius, extinctions on

Mayr, Ernst

measles

megafauna, extinction of

memes

Mendel, Gregor

Merezchkowsky, Dmitry

mergers of companies

methane

from digestion

formation of, in shale in oceans

in water

métis

Mexico, conquest of

microbes

exposure to, in air travel

invading, body dealing with

resistance to

survivability of

threat to humanity from

microbiome

Middle Ages, plagues in

Midwest, American

Miller, Stanley

mitochondria

modular assembly

Mohawk Indians

Mongol conquests

monocytes

Monsanto

Montour, Catherine

Montour, Isabel

Montour family

Montreal

mood, effect of gut on, and cultural differences in diet

mosquitoes

mother who attempted to murder her children by driving into the ocean, incident

moths, color of, changed by natural selection

mountain lions

and mule deer

mourning wars

MRSA

mucous membranes

mule deer, overpopulation

multiethnic families

music, author’s life in

mutations

caused by radiation, smoking, etc., or spontaneously

favorable, passed on

and normal variation

unfavorable

unfavorable with benefits

mutualism

Myanmar

Native Americans

alcohol and disease affecting

before contact with Europeans

captive on reservations

extermination of, attempted

farming

in Finger Lakes region

modern day

settlers’ wars with

survival of

sustainable practices of

in upstate New York

warfare

natural disasters

natural selection

example of (moths)

few examples of

nature, respect for

Neanderthal man

neo-Darwinism

neurons

connection between, created by experiences

natural selection of, from childhood to adulthood

number of, in the brain

Neutral nation

neutrophils

New England

New France

Newtown, New York

New York City

ethnic and class diversity in

rats of

New York state

European settlement of

Indian affairs office, colonial

upstate

western

1960s

nitrogen

nitrogen fixation

Norton, A. T.

nucleus

genetic material in

viral origin of

oceans

in crisis

of early Earth

formation of oil and gas in shale deposits in

photic zone of (upper 100 meters)

sedimentary rock formation in

offspring, similarities and differences from their parents

Ohio Valley

Oneida Indians

Onondaga Indians

opsonin

Ordovician

organelles

organic matter, breakdown of, with oxygen

organs

evolution of, from those of earlier species

evolution of, separately from evolution of whole bodies

oxidation of sedimentary rocks

oxygen

deprivation, and brain damage

generated and released into atmosphere

intake by animals

poisonous to bacteria

produced by bacteria

pangenesis

parasites, behavior affected by

parasitism

particulate inheritance

pathogens, infection with

PCBs in rivers

pelicans

penicillin

peptidoglycan

peroxisomes

personalized genomics

pesticides

pests

petroleum, formation of

phagocytes

phagocytosis

photosynthesis

plague

plankton

plants

cells

oxygen from

protection against oxygen poisoning

plastic bags, banning of

plastids

Pleistocene epoch

extinction event

glaciers in

plumbing and pipes, anaerobic bacteria in

pneumonic plague

polar bears (threatened)

polio

pollution

polymerase enzymes

Poor Laws (England)

popular science (mass media), influence on public

population. See human population

population genetics

populations

assimilation of

cannot be eradicated completely

coexistence of

definition of, in biology

ebb and flow of

equilibrium in interaction of

interaction between

localized

persistence of

telling them apart

population wars

assimilation the result of

on early Earth

fought over resources

in history

inevitability of

no ultimate victor and vanquished

uniqueness of each one

postwar era, and suburban living

poverty, escaping from

prairie, paved-over in suburbs

Precambrian

predators and prey

equilibrium between

pregnancy, screening for unwanted mutations (e.g. Down syndrome)

prejudice, overcoming

primates, brains of

prisoners of war

of Indians

torture of

prokaryotes

origin of, on early Earth

proteins

Protestants

pseudopod

public health, vigilance against disease

punishment

justification of

justified by belief in free will

punk subculture

viewed as useless and disruptive

purpose. See teleology

pus

rabbits, in Australia

races (or demes)

rainwater, returned to aquifer

rats

recycling

red blood cells

relationships, cherishing and nurturing

religion

arguments about

lessened hold of, especially in Europe

and purpose of life

sex as issue

remora fish, and sharks

replication, and definition of life

reptiles, free will of

Republican party

reservoir population

resistance, to antibiotics

resources, scarce

competition for

and war

reverse transcriptase

Revolutionary War

rhinoceros (threatened)

Rigand Vaudreuil, Philippe de

riots, urban

rivers, industrial pollution of

roadkill

Roundup

rural life

Russia

rust belt industries

saber-toothed cat (extinct)

Sadava, David

saliva and salivary glands

San Andreas Fault

San Fernando Valley, California, suburbia

Santa Monica Mountains

SARS

“Save the Planet” campaigns

Scala Naturae (“ladder of life”)

science

intradisciplinary syntheses in

modern, looks for process not purpose

overspecialization in

science education, of children

screening for unwanted mutations (e.g. Down syndrome), in pregnancy

sea urchins

secularism

sedimentary rocks

oxidation of, and color

selectionists

selective cloning

“selfish gene”

Semmelweis, Ignaz

Seneca Indians

sentimentalism, re environmental preservation

sequencing of DNA

settlers, dangerous lives of

sewage, wastewater from, returned to aquifer

sex issues, and religion

sharks

anatomy of

overfishing of

remora fish and

Sherman, William Tecumseh

sickle-cell anemia

Sierra Leone

Six Nations, Washington’s aim to destroy

Six Nations Reserve, Canada

sloth, giant ground (extinct)

small towns

Smithsonian museums

smog

sneezing

soap

socialism

social services, declining, in last decades

societies

old narratives vs. new scientific insights

unfair arrangements of, justified by Darwinism

Socrates

somatic cells

Southern California, youth culture

Spain

sparrows, coloration of related species of

species

archetypes of (Lamarck)

assumed to be fixed and immutable (Lamarck)

evolution of, without a purpose

extinction of

interaction of, four categories

new, from natural selection

number of, on Earth

protection of

split into daughter species that can’t interbreed

sports, reason for playing

squid

starch, digestion of

starlings

Star War movies

sterilization of “feeble minded”

stewardship. See environmental stewardship

stomach, ulcers and cancer of

stratigraphic record

“struggle for existence”

subprime mortgage bubble

suburban living

disillusionment with

success and failure, reasons for

successful people, own belief that they are totally self-made and deserve their success

sulfur

Sullivan, John

superbugs

Supreme Court, bad rulings of

“survival of the fittest”

sustainability

symbiosis

cell types as example of

vs. competition

of mammals and viruses

symbiotic bacteria

symbols

tambalacoque (dodo tree), near extinction of

T-cells (lymphocytes)

technology, clean

teleology

tetrapods

theology, on free will

Thomas Aquinas

thymus

timber wolf (threatened)

Tonegawa, Susumu

tonsillitis

toothpaste

Toxoplasma gondii (parasite of cats)

tractors

trade with Indians

neutrality in

trade routes in upstate New York

traits

of offspring, derived from parents

selectively neutral

Treaty of Paris (1783)

Tree of Peace Ceremony

trees

extinction of

species of

trilobites

Tschermak, Erich

tuberculosis

tubulin

Tully Limestone

tumor cells

tumor necrosis factor (TNF)

Tuscarora Indians

unemployment, rising, and homelessness

United States

disease in

ideology of

urban life

failure of

Urey, Harold

U.S. Steel

“us” vs. “them”

vaccination

variations

favorable, preserved

normal, mutations and

vectors

vegetarians

vertebrates

evolution of

immune system of

structure of

veterans, feelings toward

violence, vs. interdependence

viral load

viruses

are they alive?

in the human genome

jumping from species to species

method of attaching to cells

method of replicating and attacking new cells

number and size of

parasitize cells

replication of

role of, in relation to prokaryotes and eukaryotes

virus-host symbioses, beneficial

volcanoes

Wallace, Alfred Russel

war

casualties, in recent centuries

destructive cycle of

extermination as goal but rarely the outcome

inevitability of

intellectual justifications for

metaphorical (war on poverty, on drugs, etc.)

in other species

preventing

resulting in assimilation

scarce resources and

as unquestioned habitual behavior

unwinnability of

of “us” vs. “them”

Warren, Rick, The Purpose Driven Life

Washington, George

water, methane in

water trade routes, in upstate New York

weeds

Weisenberg, Catherine

Weismann, August

wells, drilling of

white blood cells

Whitehead, Alfred North

whooping cough

wilderness

caretaking of, by Native Americans

environmental stewardship of

living in the

unfinished nature of

Wilson, Woodrow

winner’s trophies

winning and losing

praise and blame for

Wisconsin

wolves

and mule deer

reintroduced in previous range

worldviews, traditional Western (exploitative) vs. modern (sustainability)

World War I, deaths

World War II

bombing destruction of

deaths

Wright, Sewall

Wyoming massacre

Yersinia pestis

yogurt, for digestive health

youth culture