Index

A

• advanced documents, R Markdown
  • about / Advanced R Markdown documents
  • R code chunks / Getting to know R code chunks
  • R code chunks, customizing / Customizing R code chunks
  • knitr options / Pandoc and knitr options
  • pandoc / Pandoc and knitr options
  • templates, using / Using R Markdown templates
  • R Notebooks, compiling / Compiling R Notebooks
  • presentations, generating / Generating R Markdown presentations
• Amazon Machine Image (AMI)
  • selecting / Choosing An amazon Machine Image
• Amazon Web Services (AWS) / MySQL – the customer data
  • using / Using Amazon Web Services as the server platform
  • URL / Creating an AWS account
  • account, creating / Creating an AWS account

B

• base plots
  • creating / Creating base plots
  • creating, with base graphics / Using the base graphics
  • base graphics, parameters / Base graphics parameters
  • annotating, with plotting functions / Annotating with base plotting functions
• base plotting functions
  • lines / Annotating with base plotting functions
  • axis / Annotating with base plotting functions
  • points / Annotating with base plotting functions
  • text / Annotating with base plotting functions
  • mtext / Annotating with base plotting functions
  • title / Annotating with base plotting functions
  • abline / Annotating with base plotting functions
  • matlines, matpoints / Annotating with base plotting functions
• base R
  • installing / Installing base R
• body elements, shinydashboard package
  • about / Boxes
  • boxes / Boxes
  • fluidRows / FluidRows
  • InfoBox / InfoBox and valueBox
  • valueBox / InfoBox and valueBox
• Bootcamp
  • URL / Further resources
• branch
  • about / Branch
  • using / Using branches
  • pull request, creating / Making a pull request
  • pull requests, reviewing / Reviewing and merging pull requests
  • pull requests, merging / Reviewing and merging pull requests

C

• chart customization
  • data, subsetting / Subsetting your data
  • titles, setting / Setting titles
  • axis labels, changing / Changing the axis labels
  • X and Y axes, swappping / Swapping the X and Y axes
  • ggplot2 charts appearance, improving / Improving the look of ggplot2 charts
• charts
  • customizing / Customizing your charts
• checkout function / Using branches
• Check Package function / Checking a package
• codingground
  • URL / Sharing your R code
• commit process / Commit
• Comprehensive R Archive Network (CRAN) / Understanding R packages
• console pane
  • about / Console pane
  • keyboard shortcuts / Console pane
• Coursera
  • about / Coursera
  • URL / Coursera
  • Data Science Specialization / Johns Hopkins University – Data Science Specialization
  • Genomic Data Science / Johns Hopkins University – Genomic Data Science
• CRAN
  • URL / References for further information
  • repository policy, URL / References for further information
• CRANberries
  • about / R and CRAN documentations
  • URL / R and CRAN documentations
• CRAN mirror
  • URL / Installing base R
• CRAN packages
  • documentation / R and CRAN documentations
• crantastic
  • about / R and CRAN documentations
  • URL / R and CRAN documentations
• Cross Validated (Stack Exchange)
  • URL / Cross Validated (Stack Exchange)
  • about / Cross Validated (Stack Exchange)
• csv files
  • URL / Adding a dataset to a package
• custom functions, Rprofile
  • adding / Adding custom functions
  • first function / The first and last functions
  • last function / The first and last functions
• customizations, RStudio
  • Rprofile, customizing / Customizing the Rprofile

D

• dashboard plan transfer, into R code
  • about / Transferring our plan into R code
  • files and folder structure / Considering a file and folder structure
  • data sources, accessing / Accessing our data sources
  • summarizing / Putting it all together
  • Twitter engagement box, creating / Creating the Twitter engagement box
• dashboards
  • about / Explaining the concept of dashboards
  • defining / Explaining the concept of dashboards
• DataCamp
  • URL / DataCamp
  • about / DataCamp
• DataJoy
  • URL / Sharing your R code
• Data Science (Stack Exchange)
  • about / Data Science (Stack Exchange)
  • URL / Data Science (Stack Exchange)
• dataset
  • adding, to package / Adding a dataset to a package
  • .rda files, creating / Creating .rda files
• data sources
  • accessing / Accessing our data sources
  • MySQL / MySQL – the customer data
  • customer data, accessing with RMySQL package / MySQL – the customer data
  • data storage system (Dropbox) / Dropbox – our data storage system
  • Google Analytics / Google Analytics – the website data
  • Twitter / Twitter – the social data
  • Google Sheets / Google Sheets – the inventory data
• Debian Control Format / Editing the DESCRIPTION file
• DESCRIPTION file
  • editing / Editing the DESCRIPTION file
  • general information / General information
  • dependencies / Dependencies
  • license / License
  • license, URL / License
• devtools
  • installing / Installing devtools
• Devtools Google Group
  • URL / References for further information
• diff / Diff
• documentation, package
  • writing / Writing the documentation for a package
  • .Rd documentation files, creating / Creating Rd documentation files
  • examples / Looking at an example documentation file
  • examples, adding / Adding examples
  • dontrun version / dontrun
  • dontshow version / dontshow
  • DESCRIPTION file, editing / Editing the DESCRIPTION file
• download option, Shiny application
  • offering, by Gist / Gist
  • offering, by GitHub / GitHub
  • offering, by zip file / Zip file
  • offering, by R package / Package
• Dropbox
  • using, with RStudio / Using RStudio with Dropbox
  • synchronization conflicts, preventing / Preventing Dropbox synchronization conflicts
  / Dropbox – our data storage system
• dygraphs
  • about / dygraphs
  • three.js package / Three.js and R
  • networkD3 package / networkD3
  • metricsgraphics / metricsgraphics
• dynamic user interface elements
  • creating / Creating dynamic user interface elements
  • creating, ways / Creating dynamic user interface elements
  • condtionalPanel() functions, using / Using conditionalPanel
  • renderui function / Taking advantage of the renderUI function

E

• EC2 instance
  • launching / Launching our EC2 instance, Launching the instance
  • Amazon Machine Image (AMI), selecting / Choosing An amazon Machine Image
  • instance type, selecting / Choosing an instance type
  • instance details, configuring / Configuring instance details
  • IAM role, creating / Creating a new IAM role
  • storage, adding / Adding storage
  • instance, tagging / Tagging an instance
  • security group, configuring / Configuring a security group
  • reviewing / Reviewing
  • key pair, creating / Creating a key pair
  • Secure Shell (SSH) / What is SSH?
  • implementing / Bringing it all together
• Elastic Compute Cloud (EC2)
  • about / Using Amazon Web Services as the server platform
• elements, shinydashboard package
  • displaying / Showing the elements of shinydashboard
  • header elements / Header elements
  • sidebar elements / Sidebar elements
  • body elements / Body elements
• Environment pane
  • about / The Environment and History panes
• existing GitHub project
  • using, with RStudio / Using an existing GitHub project with RStudio
• Extract, Transform, Load (ETL) / Creating our data architecture

F

• Fetching process / Fetch
• File pane settings, R Markdown
  • about / Explaining the R Markdown File pane settings
  • File tab arrows / File tab arrows
  • current document, saving / Saving current document
  • spelling check / Spell check
  • find/replace / Find/replace
  • question mark icon / Question mark
  • Knit HTML / Knit HTML
  • gear icon / Gear icon
  • run and re-run icon / Run and re-run icons
  • Chunks button / Chunks
  • jump to menu / Jump to menu
  • viewer pane options / Viewer pane options
• files, committing
  • stage step / Recording changes
  • commit step / Recording changes
• Files pane
  • about / The Files pane
• final app, Shiny
  • decomposing, into components / Deconstructing the final app into its components
  • user interface, components / The components of the user interface
  • server file / The server file in detail
• fluidRow() function / FluidRows
• fluidRows / FluidRows
• folders, project
  • data / Organizing your folders
  • code / Organizing your folders
  • plots / Organizing your folders
  • reports / Organizing your folders

G

• Gear icon, R Markdown File pane settings
  • about / Gear icon
  • HTML, as output format / Output Format: HTML
  • PDF, as output format / Output Format – PDF
  • Word, as output format / Output Format – Word
• geoms
  • used, for adding layers / Adding layers using geoms
  • selecting / Choosing the right geom
• geom_point() option / Adding layers using geoms
• ggplot2 chart appearance
  • improving / Improving the look of ggplot2 charts
  • graphs, creating with economist theme / Creating graphs with the economist theme
  • graphs, creating with wall street journal theme / Creating graphs with the wall street journal theme
• ggplot2 package
  • about / Introducing ggplot2
  • history / Looking at the history of ggplot2
  • Grammar of Graphics / The Grammar of Graphics
  • using / Using ggplot2
  • installing / Installing the ggplot2 package
  • Qplot() function / Qplot() and ggplot()
  • ggplot() function / Qplot() and ggplot()
  • used, for creating first graph / Creating your first graph with ggplot2
  • ggplot objects, modifying with plus operator / Modifying ggplot objects with the plus operator
  • aesthetics parameter, setting / Setting the aesthetics parameter
  • layers, adding with geoms / Adding layers using geoms
  • parameters, modifying / Modifying parameters
  • stats layers, using / Using stats layers, Saving ggplot graphs
• ggthemes / Improving the look of ggplot2 charts
• ggvis
  • about / Introducing ggvis
  • first graphic / Our first ggvis graphic
  • interactive ggvis graphs / Interactive ggvis graphs
• ggvis package
  • used, for interactive R Markdown documents / Using ggvis for interactive R Markdown documents
• Gist
  • Shiny application download option, offering / Gist
• Git
  • URL / Introducing version control, Installing Git, Further resources
  • installing, on Windows / Installing Git on Windows
  • installing, on Linux / Installing Git on Linux
  • installing, other Linux distributions / Installing Git on Linux
  • configuring / Configuring Git
  • repository / Repository
  • commit / Commit
  • diff / Diff
  • branch / Branch
  • merging process / Merge
  • fetching / Fetch
  • Pull / Pull
  • pushing process / Push
  • using, via shell / Using Git via shell
  • using, with RStudio / Using Git with RStudio
  • used, for creating new project / Creating a new project with Git
  • gitignore file / Explaining the gitignore file
  • dropdown menu / Introducing the Git drop-down menu
  • mistake, undoing / Undoing a mistake
  • remote repository on GitHub, pushing / Pushing to a remote repository on github.com
  • remote repository on github.com, pushing / Pushing to a remote repository on github.com
  • resources / Further resources
• GitHub
  • Shiny application download option, offering / GitHub
  • URL / Installing Git, Using RStudio and GitHub via SSH, Pushing to a remote repository on github.com, Making a pull request
  • and RStudio, using via / Using RStudio and GitHub via SSH
  • remote repository, pushing to / Pushing to a remote repository on github.com
• GitHub repository of devtools
  • URL / References for further information
• gitignore file / Explaining the gitignore file
• Google Analytics / Google Analytics – the website data
• Google API application
  • creating, URL / Google Analytics – the website data
• Google Sheets / Google Sheets – the inventory data
• googleVis package
  • about / googleVis
• Grammar of Graphics
  • about / The Grammar of Graphics
  • applying, with ggplot2 / Applying The Grammar of Graphics with ggplot2
• grammar of graphics plot / Qplot() and ggplot()
• graphic system, R
  • about / The graphic system in R
  • graphic device types / An introduction to the graphic devices
  • graphic devices / An introduction to the graphic devices
• graphs
  • creating, with economist theme / Creating graphs with the economist theme
  • creating, with wall street journal theme / Creating graphs with the wall street journal theme
• grid layout / The grid layout

H

• Help pane
  • about / The Files, Plots, Packages, Help, and Viewer panes, The Help pane
• History pane
  • about / The Environment and History panes, History pane
• HTML widgets
  • about / HTML widgets
  • dygraphs / dygraphs
  • Leaflet / Leaflet
  • rbokeh / rbokeh
  / HTML widgets

I

• icons
  • URL / Sidebar elements
• Identity and Access Management (IAM)
  • role, creating / Creating a new IAM role
• installation
  • shinydashboard / Installing shinydashboard
  • devtools / Installing devtools
  • roxygen2 package / Installing the roxygen2 package
  • Git / Installing Git
  • Git, on Windows / Installing Git on Windows
  • Git, on Linux / Installing Git on Linux
• interactive charts
  • embedding, into R Markdown / Embedding interactive charts into R Markdown
  • ggvis, used for interactive R Markdown documents / Using ggvis for interactive R Markdown documents
  • rCharts package / rCharts
  • googleVis package / googleVis
  • HTML widgets / HTML widgets
  • dygraphs / dygraphs
• interactive documents
  • creating, with R Markdown / Creating interactive documents with R Markdown
• interactive learning, R
  • about / Learning R interactively
  • Try R / Try R
  • DataCamp / DataCamp
  • Leada / Leada
  • Swirl / Swirl
• interactive plotting systems
  • about / Interactive plotting systems
  • ggvis / Introducing ggvis
  • ggvis graphic / Our first ggvis graphic
  • rcharts package / A look at the rCharts package
  • googleVis / Using googleVis
  • HTML widgets / HTML widgets
• interactive R Markdown documents
  • publishing / Publishing interactive R Markdown documents

J

• Jupyter
  • URL / Sharing your R code

K

• keyboard shortcuts, console pane
  • Tab / Console pane
  • Ctrl + arrow up / Console pane
  • Ctrl + L / Console pane
  • arrow up / Console pane
• knitr
  • used, for dynamic report generation / Dynamic report generation with knitr
  • OPTIONS / Pandoc and knitr options
• knitr engine / Creating vignette files
• KPI dashboard
  • building / Building your own KPI dashboard
  • data architecture, creating / Creating our data architecture
  • appearance, sketching / Sketching the look of our dashboard
  • plan, transferring into R code / Transferring our plan into R code

L

• LaTeX
  • URL / A side note about LaTeX
  • about / A side note about LaTeX
• lattice package
  • about / Introducing the lattice package
  • lattice plots, creating / Creating lattice plots
  • lattice plot, types / Getting to know the lattice plot types
  • panel functions / The lattice panel functions
  • key points / Lattice key points summary
• lattice plotting system / Introducing the lattice package
• LazyData
  • using, with package / Using LazyData with a package
• Leada
  • about / Leada
  • URL / Leada
• Linux
  • Git, installing / Installing Git on Linux
  • URL / Installing Git on Linux
• literate programming
  • about / What is literate programming?
  • characteristics / What is literate programming?
• Long Term Support (LTS) / For Ubuntu

M

• Markdown
  • about / What is Markdown?
  • URL / What is Markdown?
• merge function / Using branches
• merging process / Merge
• metricsgraphics / metricsgraphics
• Miles per Gallon (mpg) / Correcting the path for report exporting
• MySQL / MySQL – the customer data

N

• navbar page layout / The navbar page as the page layout
• navlist panel layout / The navlist panel layout

O

• online courses
  • attending / Attending online courses
  • Coursera / Coursera
  • Udacity / Udacity
  • other MOOC courses / Other MOOC courses, related platforms, and programs
  • references / Other MOOC courses, related platforms, and programs
• Open Data (Stack Exchange)
  • URL / Open Data (Stack Exchange)
  • about / Open Data (Stack Exchange)
• output
  • formats, changing / Output formats
  • appearance, changing / Changing the look of the output
  • custom CSS style sheet, using / Using a custom CSS style sheet

P

• package
  • building, with RStudio / Building packages with RStudio
  • documentation, writing / Writing the documentation for a package
  • namespaces / Understanding the namespaces of a package
  • building / Building and checking a package
  • checking / Building and checking a package, Checking a package, Customizing the package build options
  • documentation, with roxygen2 / Using roxygen2 for package documentation
  • testing / Testing a package
  • testthat, using / Using testthat in a package
  • dataset, adding / Adding a dataset to a package
  • LazyData, using / Using LazyData with a package
• package build options
  • checking / Customizing the package build options
• package development
  • reference links / References for further information
• package development
  • reference links / References for further information
• Package pane
  • about / The Files, Plots, Packages, Help, and Viewer panes, The Packages pane
• Package Vignette / Package vignette
• package vignette
  • writing, with R markdown / Writing a package vignette with R markdown
  • files, creating / Creating vignette files
• Packrat / Creating your first project
  • about / Creating a new package project with RStudio
  • using, with project / Using Packrat with a project
• pandoc
  • about / Pandoc and knitr options
  • URL / Pandoc and knitr options
• panes, RStudio
  • about / The four main panes
  • Source editor pane / The Source editor pane
  • Environment pane / The Environment and History panes
  • History pane / The Environment and History panes, History pane
  • console pane / Console pane
  • Plot pane / The Plot pane
  • Packages pane / The Packages pane
  • Help pane / The Help pane
  • Viewer pane / The Viewer pane
• parameter modifications, ggplot2 package
  • options / Modifying parameters
  • colors, changing / Changing the color of your plot
  • shape, changing / Changing the shape
  • size, changing / Changing the size
  • ggplot objects, saving in variables / Saving ggplot objects in variables
• Plot pane
  • about / The Files, Plots, Packages, Help, and Viewer panes, The Plot pane
• project
  • creating / Creating your first project, Organizing your folders, Analyzing the data, Correcting the path for report exporting
  • folders, organizing / Organizing your folders
  • data, saving / Saving the data
  • data, analyzing / Analyzing the data
  • report exporting path, correcting / Correcting the path for report exporting
  • analysis, exporting as report / Exporting your analysis as a report
• Pull / Pull
• pull request
  • creating / Making a pull request
  • reference link / Reviewing and merging pull requests
• pushing process / Push

Q

• question and answer sites
  • Stack Overflow (Stack Exchange) / Stack Overflow (Stack Exchange)
  • Data Science (Stack Exchange) / Data Science (Stack Exchange)
  • Cross Validated (Stack Exchange) / Cross Validated (Stack Exchange)
  • Open Data (Stack Exchange) / Open Data (Stack Exchange)
  • R-help / R mailing lists – R-help
  • Reddit / Reddit
  • questions, asking / How to ask questions correctly

R

• .rda files
  • creating / Creating .rda files
• R
  • graphic system / The graphic system in R
  • help obtaining, with question and answer sites / R help is on the way
  • URL, for documentation / R and CRAN documentations
  • documentation / R and CRAN documentations
  • search engines / R search engines
  • knowledge, improving / Improving your R knowledge
• R-Bloggers
  • about / R-Bloggers
  • URL / R-Bloggers
• R-Fiddle
  • URL / Sharing your R code
• R-help
  • about / R mailing lists – R-help
  • URL / R mailing lists – R-help
• r-project.org manual
  • URL / Understanding the namespaces of a package
• r-project page
  • URL / References for further information
• rCharts package
  • about / rCharts
• R code
  • sharing / Sharing your R code
• R code chunks
  • customizing / Customizing R code chunks
  • chunk options / Chunk options
  • errors, avoiding / Avoiding errors, warnings, and other messages
  • warnings, avoiding / Avoiding errors, warnings, and other messages
  • messages, avoiding / Avoiding errors, warnings, and other messages
  • distracting lines of code, hiding / Hiding distracting lines of code
  • embedding, inline / Embedding R code inline
  • labeling / Labeling code chunks
• R documentation files
  • guidelines, URL / Looking at an example documentation file
• reactive conductor
  • purpose / The purpose of the reactive conductor
• reactive objects
  • reactive source, structure / The source and endpoint structure
  • reactive endpoint, structure / The source and endpoint structure
• reactive programming
  • about / The concept of reactivity
• Reddit
  • URL / Reddit
  • about / Reddit
• renderUI() function / Taking advantage of the renderUI function
• repository / Repository
• reproducible research
  • about / The concept of reproducible research
  • conducting, with R Markdown / Doing reproducible research with R Markdown
• R FAQs
  • about / R FAQs
  • URL / R FAQs
• R graphics package
  • about / The R graphics package—base
  • plot creation, phases / The R graphics package—base
  • base plots, creating / Creating base plots
• R Journal
  • URL / The R Journal
  • about / The R Journal
• R Markdown
  • used, for conducting reproducible research / Doing reproducible research with R Markdown
  • about / What is R Markdown?
  • LaTeX / A side note about LaTeX
  • configuring / Configuring R Markdown
  • in RStudio / Getting started with R Markdown in RStudio
  • document, creating / Creating your first R Markdown document
  • advanced documents / Advanced R Markdown documents
  • used, for creating interactive documents / Creating interactive documents with R Markdown
  • using, with Shiny / Using R Markdown and Shiny
  • interactive charts, embedding / Embedding interactive charts into R Markdown
• R markdown
  • used, for writing package vignette / Writing a package vignette with R markdown
• R Markdown interface
  • about / The R Markdown interface
  • panes, inspecting / Inspecting the R Markdowns panes
  • File pane settings / Explaining the R Markdown File pane settings
• R Markdown presentations
  • generating / Generating R Markdown presentations
  • ioslides / ioslides
  • slidy / Slidy
  • beamer / Beamer
• R Markdown templates
  • using / Using R Markdown templates
  • Package Vignette / Package vignette
  • Tufte handout / The Tufte handout
• R Notebook
  • compiling / Compiling R Notebooks
• Root storage type
  • about / Adding storage
• roxygen2
  • using, for package documentation / Using roxygen2 for package documentation
  • installing / Installing the roxygen2 package, Generating Rd Files
  • Rd Files, generating / Generating Rd Files
• R package
  • Shiny application download option, offering / Package
• R packages
  • about / Understanding R packages
  • structure / Understanding the package structure
  • URL / Using testthat in a package
• Rprofile
  • about / RStudio environment customizations
  • customizing / Customizing the Rprofile
  • finding / Where to find your Rprofile
  • custom functions, adding / Adding custom functions
  • CRAN mirror, adding / More ideas for your Rprofile
  • debugging / More ideas for your Rprofile
  • example / More ideas for your Rprofile
• RPubs
  • URL / Viewer pane options, Publishing interactive R Markdown documents
• RStudio
  • downloading / Downloading and installing RStudio
  • installing / Downloading and installing RStudio, For Ubuntu, Installing RStudio and the Shiny Server
  • R, installing / Installing R
  • URL / Installing R, For Ubuntu, Question mark, Using conditionalPanel
  • installing, for Ubuntu / For Ubuntu
  • using, with different versions of R / Using RStudio with different versions of R
  • using, with Windows / Windows
  • using, with Ubuntu / Ubuntu
  • updating / Updating RStudio
  • user interface / Getting to know the RStudio interface
  • panes / The four main panes
  • Source editor pane / The four main panes, The Source editor pane
  • Environment pane / The four main panes
  • History pane / The four main panes
  • Viewer pane / The four main panes
  • Console pane / The four main panes
  • Files pane / The four main panes
  • Plots pane / The four main panes
  • Packages pane / The four main panes
  • syntax, highlighting / Syntax highlighting
  • customizing / Customizing RStudio
  • keyboard shortcuts, using / Using keyboard shortcuts
  • projects, working with / Working with RStudio and projects
  • used, for creating project / Creating a project with RStudio
  • project, locating / Locating your project
  • using, with Dropbox / Using RStudio with Dropbox
  • project, creating / Creating your first project
  • R Markdown / Getting started with R Markdown in RStudio
  • used, for creating Shiny web app / Creating a new Shiny web app with RStudio
  • used, for building packages / Building packages with RStudio
  • used, for creating package project / Creating a new package project with RStudio
  • created files, observing / Looking at the created files
  • shell, using / Using the shell from Rstudio
  • Git, using with / Using Git with RStudio
  • and GitHub, using via SSH / Using RStudio and GitHub via SSH
  • changes, tracking / Keeping track of changes
  • changes, recording / Recording changes
  • existing GitHub project, using with / Using an existing GitHub project with RStudio
  • version, selecting / Choosing your RStudio version
  • testing, in browser / RStudio and the Shiny Server in your browser
  • server environment, administrating / Administrating your RStudio server environment
  • R memory problem, solving / Getting rid of the R memory problem
  • S3 bucket, connecting / Connecting our S3 bucket with RStudio
  • server management / Basic RStudio server management
  • extending / Extending RStudio, finding answers, and more
  • customizations / RStudio environment customizations
• RStudio cheat sheets
  • URL / RStudio cheat sheets
  • about / RStudio cheat sheets
• RStudio Server
  • managing / Managing the RStudio Server
  • Amazon Web Services (AWS), using / Using Amazon Web Services as the server platform
  • S3, using / Using S3 to store our data
  • EC2 instance, launching / Launching our EC2 instance
  • connecting, with EC2 instance / Connecting with the new EC2 instance

S

• S3
  • used, for storing data / Using S3 to store our data
  • bucket, creating / Creating our bucket
  • dataset, uploading to bucket / Uploading a dataset to the bucket
• Secure Shell (SSH)
  • about / What is SSH?
• self-hosted Shiny server
  • setting up / Setting up a self-hosted Shiny server
• Shiny
  • about / Introducing Shiny – the app framework
  • components / Introducing Shiny – the app framework
  • ui.R function / Introducing Shiny – the app framework
  • inbuilt example apps / Introducing Shiny – the app framework
  • web app, creating with RStudio / Creating a new Shiny web app with RStudio
  • final app, decomposing into components / Deconstructing the final app into its components
  • server and ui file, connection between / The connection between the server and the ui file
  • reactive objects / The concept of reactivity
  • R Markdown, using with / Using R Markdown and Shiny
  • Document option / Shiny Document
  • Presentation / Shiny Presentation
  • Markdown document, dissembling / Disassembling a Shiny R Markdown document
• Shiny application
  • creating / Creating your first Shiny application
  • final app, sketching / Sketching the final app
  • user interface, constructing / Constructing the user interface for your app
  • server file, creating / Creating the server file
  • final application / The final application
  • widgets, adding / Adding widgets to your application
  • individualizing, with Shiny tags / Individualizing your app even further with Shiny tags
  • sharing, with other users / Sharing your Shiny application with others
  • download option, offering / Offering a download of your Shiny app
  • deploying, to web / Deploying your app to the web
• shinyapps.io
  • URL / Publishing interactive R Markdown documents
• Shinyapps.io
  • URL / Shinyapps.io
  • deploying, to web / Shinyapps.io
  • using, with RStudio / Shinyapps.io
• shinydashboard package
  • about / Introducing the shinydashboard package
  • installing / Installing shinydashboard
  • structure / Explaining the structure of shinydashboard
  • elements, displaying / Showing the elements of shinydashboard
  • URL / Showing the elements of shinydashboard
• Shiny ecosystem
  • diving / Diving into the Shiny ecosystem
  • apps, creating with more files / Creating apps with more files
  • Shiny package, expanding / Expanding the Shiny package
• Shiny interface layouts
  • exploring / Exploring the Shiny interface layouts
  • sidebar layout / The sidebar layout
  • grid layout / The grid layout
  • tabset panel layout / The tabset panel layout
  • navlist panel layout / The navlist panel layout
  • navbar page, as page layout / The navbar page as the page layout
  • dynamic user interface elements, creating / Creating dynamic user interface elements
• Shiny package
  • expanding / Expanding the Shiny package
  • shinyAce / Expanding the Shiny package
  • shinybootstrap2 / Expanding the Shiny package
  • shinyBS / Expanding the Shiny package
  • shinydashboard / Expanding the Shiny package
  • shinyFiles / Expanding the Shiny package
  • shinyjs / Expanding the Shiny package
  • shinyRGL / Expanding the Shiny package
  • shinystan / Expanding the Shiny package
  • shinythemes / Expanding the Shiny package
  • shinyTree / Expanding the Shiny package
• Shiny R Markdown document
  • dissembling / Disassembling a Shiny R Markdown document
• Shiny Server
  • installing / Installing RStudio and the Shiny Server
  • testing, in browser / RStudio and the Shiny Server in your browser
  • managing / Managing the Shiny Server
  • basic commands / Basic commands for the Shiny Server
• shinyServer() function / The server file in detail
• Shiny tags
  • used, for individualizing Shiny application / Individualizing your app even further with Shiny tags
  • tags$h1 / Individualizing your app even further with Shiny tags
  • tags$hr / Individualizing your app even further with Shiny tags
  • tags$br / Individualizing your app even further with Shiny tags
  • tags$strong = / Individualizing your app even further with Shiny tags
  • tags$div / Individualizing your app even further with Shiny tags
  • tags$a / Individualizing your app even further with Shiny tags
  • tags$iframe / Individualizing your app even further with Shiny tags
• shinyUI() page layouts
  • pageWithSidebar() / Exploring the Shiny interface layouts
  • navbarPage() / Exploring the Shiny interface layouts
  • fixedPage() / Exploring the Shiny interface layouts
  • fluidPage() / Exploring the Shiny interface layouts
• Shiny user interface
  • scope / Discovering the scope of the Shiny user interface
• Shiny web app
  • creating, with RStudio / Creating a new Shiny web app with RStudio
• sidebar layout / The sidebar layout
• Simple Storage Service (S3)
  • about / Using Amazon Web Services as the server platform
• Source editor pane
  • about / The Source editor pane
• SSH
  • RStudio and GitHub, using via / Using RStudio and GitHub via SSH
• Stack Exchange
  • about / Getting questions and answers
• Stack Overflow (Stack Exchange)
  • about / Stack Overflow (Stack Exchange)
  • URL / Stack Overflow (Stack Exchange)
• structure, R packages
  • about / Understanding the package structure
  • description / Understanding the package structure
  • R / Understanding the package structure
  • test / Understanding the package structure
  • man / Understanding the package structure
  • vignettes / Understanding the package structure
  • data / Understanding the package structure
  • namespace / Understanding the package structure
• subreddits
  • about / Reddit
• Sweave
  • about / A brief side note on Sweave
  • URL / A brief side note on Sweave
• Swirl
  • about / Swirl
• syntax, highlighting
  • about / Syntax highlighting
  • code completion / Code completion
  • R Code, executing from source pane / Executing R Code from the source pane
  • code, folding / Code folding
  • code, debugging / Debugging code

T

• tabset panel layout / The tabset panel layout
• tangling / What is literate programming?
• testthat
  • using, in package / Using testthat in a package
• Time-Series object / Creating base plots
• Try R
  • about / Try R
  • URL / Try R
• Tufte handout
  • URL / The Tufte handout
  • about / The Tufte handout
• Twitter
  • about / Twitter – the social data
  • URL / Twitter – the social data
  • engagement box, creating / Creating the Twitter engagement box

U

• Ubuntu
  • RStudio, using with / Ubuntu
• Udacity
  • about / Udacity
• use_testthat() function / Using testthat in a package

V

• version control
  • about / Introducing version control
  • Git, installing / Installing Git
  • Git, configuring / Configuring Git
  • terminologies / Explaining the basic terminology
  • Git, using via shell / Using Git via shell
  • shell, using from RStudio / Using the shell from Rstudio
• Viewer pane
  • about / The Files, Plots, Packages, Help, and Viewer panes, The Viewer pane
• vignette engines / Writing a package vignette with R markdown
• vignettes / Writing a package vignette with R markdown

W

• weaving / What is literate programming?
• weight of the car (wt) / Correcting the path for report exporting
• widgets, adding to Shiny application
  • about / Adding widgets to your application
  • input elements / Shiny input elements
  • output elements / A brief overview of the output elements
• Windows
  • RStudio, using with / Windows
  • Git, installing / Installing Git on Windows

Y

• YAML
  • URL / Changing the look of the output

Z

• zip file
  • Shiny application download option, offering / Zip file